100000 GFF lines processed.
200000 GFF lines processed.
300000 GFF lines processed.
400000 GFF lines processed.
500000 GFF lines processed.
600000 GFF lines processed.
700000 GFF lines processed.
793332 GFF lines processed.
100000 SAM alignment records processed.
200000 SAM alignment records processed.
259158 SAM alignments  processed.
100000 SAM alignment records processed.
200000 SAM alignment records processed.
259135 SAM alignments  processed.
100000 SAM alignment records processed.
200000 SAM alignment records processed.
257612 SAM alignments  processed.
100000 SAM alignment records processed.
200000 SAM alignment records processed.
260541 SAM alignments  processed.