Aurora DESeq2
Differential Expression Analysis
DESeq2 analysis
MA plot
Count matrix heatmap
PCA plot
Outputs
_site.yml
01_deseq2_analysis.html
01_deseq2_analysis.Rmd
02_ma_plot.html
02_ma_plot.Rmd
03_count_matrix_heatmap.html
03_count_matrix_heatmap.Rmd
04_pca_plot.html
04_pca_plot.Rmd
index.Rmd
padj-sorted-genes.txt
padj-sorted-significant-genes.txt
03_count_matrix_heatmap_files
figure-html
unnamed-chunk-1-1.png
site_libs
bootstrap-3.3.5
css
bootstrap-theme.css
bootstrap-theme.css.map
bootstrap-theme.min.css
bootstrap.css
bootstrap.css.map
bootstrap.min.css
cerulean.min.css
cosmo.min.css
flatly.min.css
journal.min.css
lumen.min.css
paper.min.css
readable.min.css
sandstone.min.css
simplex.min.css
spacelab.min.css
united.min.css
yeti.min.css
fonts
Lato.ttf
LatoBold.ttf
LatoItalic.ttf
NewsCycle.ttf
NewsCycleBold.ttf
OpenSans.ttf
OpenSansBold.ttf
OpenSansBoldItalic.ttf
OpenSansItalic.ttf
OpenSansLight.ttf
OpenSansLightItalic.ttf
Raleway.ttf
RalewayBold.ttf
Roboto.ttf
RobotoBold.ttf
RobotoLight.ttf
RobotoMedium.ttf
SourceSansPro.ttf
SourceSansProBold.ttf
SourceSansProItalic.ttf
SourceSansProLight.ttf
Ubuntu.ttf
fonts
glyphicons-halflings-regular.eot
glyphicons-halflings-regular.svg
glyphicons-halflings-regular.ttf
glyphicons-halflings-regular.woff
glyphicons-halflings-regular.woff2
js
bootstrap.js
bootstrap.min.js
npm.js
shim
html5shiv.min.js
respond.min.js
htmlwidgets-0.5
htmlwidgets.js
jquery-1.11.3
jquery.min.js
navigation-1.1
codefolding.js
FileSaver.min.js
sourceembed.js
tabsets.js
plotly-binding-4.5.6
plotly.js
plotlyjs-1.16.3
LICENSE
plotly-htmlwidgets.css
plotly-latest.min.js
